| ZKO number |
ZKO423 |
| Recent progress of this line |
F1 individuals have been identified
|
|
Gene name |
si:ch73-380n15.2
|
|
Ensembl ID |
ENSDARG00000087224
|
|
Zebrafish strain |
AB
|
|
Cas9 target site 1 sequence |
antisense strand
GAGTCCCAGCTCCACCACTAtgg
|
|
Cas9 target site 2 sequence |
|
|
Position in the gene |
exon2
|
|
Restriction enzyme (RE) |
BstXI(CCANNNNN^NTGG)
|
|
PCR primer (forward) |
TACTAAAATGACTGCGAACTGC
|
|
PCR primer (reverse) |
TCTAATGTGAGCCATACTGTC
|
|
Length of expected PCR product (bp)
|
445
|
|
Length of expected RE digestion product (bp) |
246+199
|
|
Plasmids used for making Cas9 mRNA |
pXT7-hCAS9
|
| Plasmids used for making gRNA |
pMD19T-gRNA
|
| Primers used for making gRNA |
Pr-ZKO
|
|
Dosage of injected Cas9 mRNA (ng/ul)
|
500
|
|
Dosage of injected gRNA (ng/ul)
|
200
|
|
Survival rate of F0 embryo @ 1dpf (%)
|
|
|
Method to estimate mutation efficiency |
Restriction enzyme digestionBstXI(CCANNNNN^NTGG)
|
|
Stage of the embryos collected for mutation detection |
http://www.zfish.cn/upload/file/ZKOPDF/ZKO423.pdf
|
|
Mutation efficiency in F0 embryos (%)
|
83
|
Picture from F0 embryos
(gel picture or sequencing picture) |
|
|
Mutation type
|
deletion
|
|
Germline transmission efficiency in adult F0
|
100%(9/9: Number of positive F0 / Total number of F0 screened)
|
|
Wild-type (WT) sequence
|
TCAATGATTCTGCACCCATAGTGGTGGAGCTGGGACTCACACT
|
Germline mutations in selected F0
(By screening F1 embryos) |
F0-1 |
|
|
F0-2
|
|
Mosaicism in selected F0
(By screening F1 adults) |
F0-1
|
TCAATGATTCTGCACCCATAG--------CTGGGACTCACACT(-8bp)
|
|
F0-2
|
TCAAT-----------------GGTGGAGCTGGGACTCACACT(-17bp)
|
|
Allele name and predicted product
|
423a
423b |
TCAATGATTCTGCACCCATAG--------CTGGGACTCACACT; Truncated protein(68aa)
|
| TCAAT-----------------GGTGGAGCTGGGACTCACACT;Truncated protein(66aa) |
|
突变创建时间 |
2014-09-01
|
|
填表时间 |
2013/12/17
|
|
修改时间 |
2016/8/12
|
|
PI/负责人 (工作单位) |
|