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If you need ZKO Alleles,please contact luyuanpan@ihb.ac.cn
ZKO number
ZKO406
Recent progress of this line
F2 individuals have been indentified
Gene name
npy1r
Ensembl ID
ENSDARG00000037411
Zebrafish strain
AB
Cas9 target site 1 sequence
sense strand
GGACCATTGGGTTTTCGGTG
Cas9 target site 2 sequence
Position in the gene
exon2
Restriction enzyme (RE)
n/a
PCR primer (
forward
)
ATGCCAGACTCCGCCTTCT
PCR primer (
reverse
)
GTCAAGCTGATGCCCAGG
Length of expected PCR product (bp)
503
Length of expected RE digestion product (bp)
335+168
Plasmids used for making Cas9 mRNA
pXT7-hCAS9
Plasmids used for making gRNA
pMD19T-gRNA
Primers used for making gRNA
Pr-ZKO 406
Dosage of injected Cas9 mRNA (ng/ul)
300
Dosage of injected gRNA (ng/ul)
20
Survival rate of F0 embryo @ 1dpf (%)
90
Method to estimate mutation efficiency
T7EI detection
Stage of the embryos collected for mutation detection
http://www.zfish.cn/upload/file/ZKOPDF/ZKO406.pdf
Mutation efficiency in F0 embryos (%)
50
Picture from F
0
embryos
(gel picture or sequencing picture)
/upload/2015-01-22/635575608755398092.png
npy
Mutation type
Indel
Germline transmission efficiency in adult F
0
20
Wild-type (WT) sequence
ATGGACCATTGGGTTTTCGGTGCGGTCATG
Germline mutations in selected F0
(By screening F1 embryos)
F0-1
F0-2
Mosaicism in selected F0
(By screening F1 adults)
F0-1
ATGGACCATTG-----CGGTCATG
F0-2
Allele name and predicted product
406a
406b
ATGGACCATTG-----CGGTCATG Truncated protein (192 aa)
突变创建时间
2014-06-09
填表时间
2013/12/16
修改时间
2016/12/29
PI/负责人 (工作单位)
Genotype Information:
Links:
国家水生生物资源库
EENDB
ZAP
ZHA, US
AZPF
TZCF
ZOMB
NBRP-Zebr
EZRC
ZIRC
ZFIN
More
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